YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90413057, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKILYRDTK NGKLGGVCAG IAEYFGMEIW LVRILAVSAF LLGVGFFATL AYIAACLILD  60
   61 KMPEERTQQQ TTYKEHNVKQ KPWQAGQPAE QILRNVESEL NGMEGNLRKM EAYVTSSAFN 120
  121 VDREFKNL

Type	Start	End	Confidence
Cytoplasmic	1	11	0.68
Transmembrane Helix	12	32	0.53
Non-Cytoplasmic	33	33	0.61
Transmembrane Helix	34	59	0.84
Cytoplasmic	60	128	0.84