YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90326000, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPIFGRGPS LQLRLFLAIL LSASLMLADS RLDAFANVRY LLNSAIAPLQ YAANLPREML  60
   61 DGVSSQVSSH QRILSENKAL KRDVLVMQSE VLLLDQLKQE NQRLRELLGS PFVRDERKMI 120
  121 AEVMAVDSDP YSHQVMIDKG RIDGVYEGQP VINEKGIVGQ ISYVGAHNSR VLLLIDPTHA 180
  181 IPIQVVRNDI RVIASGSGQS DLMQLEHVPS STDIEVGDLL VSSGLGGRYP EGYPVAYVTE 240
  241 FSFDNKRPFA QIKARPTVQF DRLRYLLLVW PTERENMLEE VPTSGE

Type	Start	End	Confidence
Signal Peptide	1	30	0.98
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	286	0.99