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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90412639, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIGVPKEIF ANETRVAATP KTVEQLLKMG FSVAIEQNAG VLASFGDAAF EAAGATIVST  60
   61 EDVWQSDLIL KVNAPQINDE TGVDEFDLIK EGASIACFIW PAQNKELLDK LSTKNINVMA 120
  121 MDSVPRISRA QALDALSSMA NIAGYRAVVE AAHEFGRFFT GQITAAGKVP PAKVLVAGAG 180
  181 VAGLAAIGAA GSLGAIVRSF DVRPEVKEQV ESMGASFLEV DFKEDTSTGD GYAKEMSDDF 240
  241 NKAAERLYAE QAKDVDIIIT TALIPGRPAP KLITKEMVDS MKSGSVIVDL AAANGGNCAY 300
  301 TEANKVITTP NGVKVIGYTD MVGRLPTQSS QLYGTNLVNL LKLLCKEKDG NINIDFEDEV 360
  361 LRGLTVIKEG EITWPAPPIK VSAAPQQPAA EVKPKVVVEK APMSPVKKYG LMAAGIAAFG 420
  421 WIANYAPAEF LAHLTVFVLA CVVGYYVVWN VSHALHTPLM SVTNAISGII IVGAVLQVSQ 480
  481 GSSLVTVLAF IAVLIASINI FGGFTVTKRM LEMFRKDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle