YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90412617, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSRATTLVA LCASVAFSAQ AKTDTVTVTG STSVSHVMEI LAEAYSTSHK DTFIAIQGIG  60
   61 SSAGISAVKQ DAAEMGMSSR RLSEDEITPD VKMVTIAHDG IALVVNKNNP VDNLTKEQVS 120
  121 KIYHGEIKNW KEVGGPDLKM AVVSRENASG SRFSFEDFMG LTQNIKGHRV SDINPQLLVV 180
  181 NTNGMVKSLV SRNLHALGYM SLGSVDDSIK PLSFEGIKPT IDNLESGDYL ISRPFLMLYK 240
  241 EKNVSKNAQA FLNYVTSSEG QNIIDERGYI AINKS

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	275	0.99