YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90411793, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWYLAVLKK YAVFQGRARR QEYWYFFLFN IVIAIALGIL DGVLDTPGTP ESGLLSTLYS  60
   61 LAILVPSISV GVRRLHDSGR KGWWMLIGLI PLIGALVLLY FFIQDSQPGS NEYGENPKEN 120
  121 NNDSGQISM

Type	Start	End	Confidence
Cytoplasmic	1	22	0.97
Transmembrane Helix	23	44	0.91
Non-Cytoplasmic	45	52	0.87
Transmembrane Helix	53	72	0.94
Cytoplasmic	73	81	0.85
Transmembrane Helix	82	103	0.95
Non-Cytoplasmic	104	129	0.99