YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90411625, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVIVVTSG KGGVGKTTSS AAIACGLALA GKKTAVIDFD IGLRNLDLIM GCERRVVYDF  60
   61 VNVINGEASL NQALIKDKRV DNLFVLPASQ TRDKDALTKE GVARILHDLD EMGFEFVICD 120
  121 SPAGIETGAL MALYFADEAI VTTNPEVSSV RDSDRILGIL DSKSRRAEQA EEPVKQHLLL 180
  181 TRYNPARVTN GDMLSVQDVE DILHIPLLGV IPESQAVLNA SNKGEPVIFD TESDAGLAYG 240
  241 DTIARLLGEE RPFRFLEEEK KGFLKRLFGG

Type	Start	End	Confidence
Signal Peptide	1	30	0.64
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	270	0.99