YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90328212, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQRTHLKLF VIFIGFMSIF FSTNIWASKQ TTLDTVQHTA ERHVEQLINV PERGELKLTA  60
   61 ASLDSRLRLS ECSEPLNSTI PGKQSLTGNV TVLISCSPEN WQVYVPVRIQ LLLPRVVAAT 120
  121 PLARGLVLNA SHLSVKLVES RFQRGIVFEH PTEIIGSKVK RTIKMGEAVQ GNDICLVCRN 180
  181 DAVIIKAGNG GLNVITNGTA LSDGALGEQI RVQNTKSKRI IDGIVSAVGE VTVNY

Type	Start	End	Confidence
Cytoplasmic	1	8	0.54
Transmembrane Helix	9	28	0.61
Non-Cytoplasmic	29	235	0.97