YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90328126, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSLVALSV LAATALPTVV SAADYSDDIH KNDYSWSQFN IMYVVDEKGA GAESNHDYLE  60
   61 MEFGGRSGIF DLYGYVDVFN LTSDPDSDKA GAEKIFMKFA PRMSLDAMTG KDLSFGPVQE 120
  121 LYVSTLMEWG GNSGVNTQKI GLGSDIMVPW FGKMGLNLYG TYDSNTKDWN GGQISTNWFK 180
  181 PFHFFDNGSF ISYQGYIDYQ FGMNDDESYQ SSTGGAMFNG IYWHSDRFAV GYGLKLYDNV 240
  241 YGFKDGEALP WAPKAESSGA AHYVSVTYKF

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	270	0.99