YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90410778, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKTSPVRKA VIPVAGLGTR MLPATKAIPK EMLPIVDRPL IQYVVNECVA AGIKEIILVT  60
   61 HSSKNSIENH FDTSFELEAT LEKRVKRQLL EEVQSICPKD VTIMHVRQGQ AKGLGHAVLS 120
  121 ARPLVGDEPF AVVLPDVVLD DAASDLRTEN MAAMIAAFNE TKVSQVMVEP VPMADVSSYG 180
  181 VADVSGVDLK PGETAAMTKV VEKPALEDAP SNLAIVGRYV LPAEIWGMLE RTPVGAGDEI 240
  241 QLTDAIDMLM ESQQVNAFHM SGKSHDCGTK LGYMQAFVEY GIRHNSLGDD FKAYLKDMVK 300
  301 TL

Type	Start	End	Confidence
Signal Peptide	1	27	0.65
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	302	0.99