YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90410694, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIFQRFTLL TLTLLLSAGI TGCSQKFNDV NDTLSVALFG DDDTELASDD VERLPYASLY  60
   61 AQVDDGPQAF MVLALAESAL SLTPESPNTR TQLKWVSSDK GMLVTESGRL IKSMNLPQGN 120
  121 LIDTYSSQPD PLTLGLQRAS TPMYWQRTID WQPGYHFGYQ LTSRFLRQDN AVIMINERPI 180
  181 ETWHFIESVT IDALDTHYQN QFWIDGKTGK VLKSQQTLAP GLPVINMTLL KPYS

Type	Start	End	Confidence
Signal Peptide	1	24	0.97
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	234	0.99