YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90311425, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.52
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPPVNTGR RKFLTLTTGV VGGIGAAAVA VPFIKSWSPS EKAKAAGAPV TVDISKIQPG  60
   61 QLIRVEWRGK PVWVVSRTPK ILDELASHAD RLRDPDSLEA QQPGYAQNPQ RSLKPKIFVA 120
  121 VGICTHLGCS PSYLPDSFSE QVEGVQSGFF CPCHGSKFDL AGRVFQNVPA PLNLVIPPHY 180
  181 YISDTQILIG QDKGDA

Type	Start	End	Confidence
Cytoplasmic	1	12	0.42
Transmembrane Helix	13	31	0.50
Non-Cytoplasmic	32	196	0.92