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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|120405401, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTIELSIGG MTCASCAARV EKKLNKLDGV TATVNFATEK ARVAFGDEVS PGQLVSAVES  60
   61 AGYQAELPER PDEPAEPTDD PTAALKRRLL ICVALSVPVI AMAMVPVLQF TYWQWLSLTL 120
  121 AAPVVVWGAW PFHQAAWTNL RHGTATMDTL ISIGTLAALG WSIYALFWGT AGIPGMTHPF 180
  181 ELTIARTDGT SNIYLEAAAG VTTFILAGRY FEARAKRRAG AALRALLELG AREVTVRRGG 240
  241 AEQRIPIEQL VIGDEFVVRP GEKIAADGTV VEGASAVDAS MLTGESVPEE VQPGDQVVGA 300
  301 TVNVDGRLVV RADRVGSDTQ LAQMARMVED AQNGKAQAQR LADRISGVFV PIVIALSVAT 360
  361 LGFWIGSGFP VAAAFTAAVA VLIIACPCAL GLATPTALMV GTGRGAQLGI LIKGPEVLED 420
  421 TRRVDTVILD KTGTVTTGSM TLVDVFAAEG EQPDEVLRVA GAVESSSEHP IARAIAAGAQ 480
  481 EKFGELPAVT AFTNLRGLGV SGQVDGRAVL LGRLRLLADR SHEIPSELEV AVARAESDGR 540
  541 TAVVVGWDGQ ARGVLMVADA VKPTSAEAIS LLKRLGLTPI MVTGDNEAVA RAVAAEVGID 600
  601 EVIAGVLPQD KVDTVKRLQR DGKVVAMVGD GVNDAAALAQ ADLGLAMGSG TDVAIEASDL 660
  661 TLVSNDLRAV PDAIRLSRKT LSTIKGNLFW AFAYNVAALP LAAAGLLNPM IAGAAMAFSS 720
  721 VFVVSNSLRL RAFTPSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle