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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|120401674, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSFNPTTKT QAALTSALQA ATAAGNPQIA PAHLLMALLT QNDGIAAPLL EAVGVEPATI  60
   61 RAETQRLLDR LPSATGSSSQ PQLAPQAIAA ITAATHLASE MDDEYVSTEH LLVGLATGDA 120
  121 DTAKLLTGHG ASPQALREAF VKVRGSARVT SPDPEGTYQA LEKYSTDLTA RAREGKLDPV 180
  181 IGRDNEIRRV VQVLSRRTKN NPVLIGEPGV GKTAIVEGLA QRIIAGDVPE SLRDKTVVSL 240
  241 DLGSMVAGAK YRGEFEERLK AVLDDIKNSA GQIITFIDEL HTIVGAGATG ESAMDAGNMI 300
  301 KPMLARGELR LVGATTLDEY RKYIEKDAAL ERRFQQVMVG EPSVEDTVGI LRGLKERYEV 360
  361 HHGVRITDSA LVSAATLSDR YITARFLPDK AIDLVDEAAS RLRMEIDSRP VEIDEVERLV 420
  421 RRLEIEEMAL EKESDAASKD RLEKLRSELA DQKEKLSELT TRWQNEKGAI DVVRELKEQL 480
  481 EELRGAADRA ERDGDLAKAA ELRYGRIPEV EKKLDAAVPQ AEARDNVMLK EEVGPDDIAD 540
  541 VVSAWTGIPA GRMLEGETAK LLRMEDELGK RVVGQKNAVQ AVSDAVRRSR AGVADPNRPT 600
  601 GSFMFLGPTG VGKTELAKAL AEFLFDDERA MVRIDMSEYG EKHSVARLVG APPGYVGYDQ 660
  661 GGQLTEAVRR RPYTVILFDE IEKAHPDVFD VLLQVLDEGR LTDGQGRTVD FRNTILILTS 720
  721 NLGAGGNEEQ VMAAVRAAFK PEFINRLDDV IMFDALNPEQ LVSIVDIQLA QLQKRLAQRR 780
  781 LTLEVSLPAK KWLAERGFDP LYGARPLRRL IQQAIGDQLA KLLLAGDVHD GDVVPVNVSP 840
  841 DGDSLVLG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle