YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120402245, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDERDGVSS ADTDSGGQTD DGDRGQTAVV TRPLRPTGKR SRRAGEAGDA DKAPEADSSG  60
   61 SKDDDGSGPK AKKKTAKKPK DGPSRNPLVF VINYLKEVVG ELRKVIWPNR KEMATYTTVV 120
  121 LLFLVFMVAL IGGVDLGLGK LVTWIFA

Type	Start	End	Confidence
Cytoplasmic	1	112	0.99
Transmembrane Helix	113	136	0.88
Non-Cytoplasmic	137	147	0.87