YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120405720, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEANRPDPR RRSSAGDARS RKAPASRPGK PGKSGDAARG KPRGAARRET RSADPRSPKE  60
   61 LTGAAADPGF VDDTGDEPGA DSIRQSIIAS AEQAAEQRFG SAARRAAILA AVICVLTLTI 120
  121 AGPVRTYFAQ RTEMKQLQAS EAQLRDQISE LEQQKAKLAD PVFIAAQARE RLGFVMPGEI 180
  181 PYQVQLPPGA AQPAAPPDEL AEAKTNDPWY TSLWHTIADA PHGVSPMAPP APPGVPGAPE 240
  241 PVAPGAPPSG G

Type	Start	End	Confidence
Cytoplasmic	1	105	0.84
Transmembrane Helix	106	128	0.85
Non-Cytoplasmic	129	251	0.90