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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109638227
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TFCFLLVFVV LILVHPALSI YFNILSSTES LTISGNRTLV SPGDVFELGF FRTTSSSRWY  60
   61 LGIWYKKVYF RTYVWVANRD NPLSRSIGTL RISNMNLVLL DHSNKSVWST NLTRGNERSP 120
  121 VVAELLANGN FVMRDSNNND ASGFLWQSFD FPTDTLLPEM KLGYDLKTGL NRFLTAWRNS 180
  181 DDPSSGDYSY KLENRELPEF YLLKSGFQVH RSGPWNGVRF SGIPENQKLS YMVYNFTENS 240
  241 EEVAYTFRMT NNSIYSRLKV SSHGYLQRLT WTPTSIAWNL FWSSPVDIRC DLYKACGRNS 300
  301 YCDGNTSPLC NCIQGFMPSN VQQWYIGEAA GGCIRRTRLS CSGDGFTRMR RMKLPETTKA 360
  361 IVDRTIGVKE CEKRCLSDCN CTAFANADIR NGGTGCVIWT GHLQDIRTYY DEGQDLYVRL 420
  421 AADDLVKKKN ANWKIISLIV GVSVVLLLLL LIGFCLWKRK QNRAKAMATS IVNQQRNQNV 480
  481 LMNTMTQSDK RQLSRENKAD EFELPLIELE AVVKATENFS NCNELGRGGF GIVYKGMLDG 540
  541 QEVAVKRLSK TSLQGIDEFM NEVRLIARLQ HINLVRILGC CIEADEKILI YEYLENSSLD 600
  601 YFLFGKKRSS NLNWKDRFAI TNGVARGLLY LHQDSRFRII HRDLKPGNIL LDKYMIPKIS 660
  661 DFGMARIFAR DETQVRTDNA VGTYGYMSPE YAMYGVISEK TDVFSFGVIV LEIVIGKRNR 720
  721 GFYQVNPENN LPSYAWTHWA EGRALEIVDP VILDSLSSLP STFKPKEVLK CIQIGLLCIQ 780
  781 ERAEHRPTMS SVVWMLGSEA TEIPQPKPPV YCLIASYYAN NPSSSRQFDD DESWTVNKYT 840
  841 CSVIDAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle