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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|106364214
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGVRNIYHH SYTSFLLVFV VMILFRPTLS IYFNTLSSTE SLTISNNRTL VSPGDVFELG  60
   61 FFKTTSSSRW YLGIWYKKLP GRTYVWVANR DNPLSNSIGT LKISNMNLVL LDHSNKSVWS 120
  121 TNHTRGNERS LVVAELLANG NFLVRDSNNN DAYGFLWQSF DYPTDTLLPE MKLGYDLKIG 180
  181 LNRSLTSWRS SDDPSSGDFS YKLEGSRRLP EFYLMQGDVR EHRSGPWNGI QFSGIPEDQK 240
  241 LSYMMYNFTD NSEEVAYTFL MTNNSFYSRL KLSSEGYLER LTWAPSSGIW NVFWSSPNHQ 300
  301 CDMYRMCGTY SYCDVNTSPS CNCIPGFNPK NRQQWDLRIP ISGCIRRTRL GCSGDGFTRM 360
  361 KNMKLPDTTM AIVDRSISVK ECEKRCLSDC NCTAFANADI RNRGTGCVIW TGELEDMRNY 420
  421 AEGGQDLYVR LAAADLVKKR NANWKIISLI VGVSVVLLLL LLLLIMFCLW KRKQNRAKAM 480
  481 ATSIVNQQRN QNVLMNGMTQ SNKRQLSREN KADEFELPLI ELEAVVKATE NFSNCNELGQ 540
  541 GGFGIVYKGM LDGQEVAVKR LSKTSLQGID EFMNEVRLIA RLQHINLVRI LGCCIEADEK 600
  601 ILIYEYLENS SLDYFLFGKK RSSNLDWKDR FAITNGVARG LLYLHQDSRF RIIHRDLKPG 660
  661 NILLDKYMIP KISDFGMARI FARDETQART DNAVGTYGYM SPEYAMDGVI SEKTDVFSFG 720
  721 VIVLEIVSGK RNRGFYQVNP ENNLPSYAWT HWAEGRALEI VDPVIVDSSS SLPSTFQPKE 780
  781 VLKCIQIGLL CIQERAEHRP TMSSVVWMLG SEATEIPQPK PPVYCLIASY YANNPSSSRQ 840
  841 FDDDESWTVN KYTCSVIDAR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle