YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89891526, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENTNQPQNT EVRSRRGREP FMPESDGMGM MDAVKAVFNN YTDFSGRARR SEYWYWQLFN  60
   61 FIVFLILYVP MIIGAATENE AIAIPFAILF LLYALATIIP SLAVIVRRLH DTGRSGWFYF 120
  121 ISMIPFVGTI ILLIWLIEDS KHGANQWGPN PKGIGNDDFN QNQF

Type	Start	End	Confidence
Cytoplasmic	1	53	0.99
Transmembrane Helix	54	76	0.91
Non-Cytoplasmic	77	81	0.90
Transmembrane Helix	82	106	0.90
Cytoplasmic	107	115	0.93
Transmembrane Helix	116	137	0.96
Non-Cytoplasmic	138	164	0.99