YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89348866, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPSEESGTP PPPASVRPVV SVQAVSLSYG KTRALDGVSL DIPAGRMVGL IGPDGVGKSS  60
   61 LLSLIAGARV IQQGRITVLG GDMADARHRR TTCPQIAYMP QGLGKNLYPT LSVFENVDFF 120
  121 GRLFGQGRAE RERRIGELLE STGLAPFADR PAGKLSGGMK QKLGLCCALI HDPDLLILDE 180
  181 PTTGVDPLSR RQFWELIETI RAGRPGMSVI VATAYMEEAA RFDWLVAMDA GKVLATGAPA 240
  241 DLLAKTGAAN LDAAFIALLP EEERAGHREV VIPPRPEGAD GEIAIEAEHL TMRFGDFTAV 300
  301 DDVSFRIARG EIFGFLGSNG CGKTTTMKML TGLLPATEGK ARLFGQEVDP DDLAVRRRVG 360
  361 YMSQAFSLYT ELTVRQNLDL HARLFGLAPK AIPARIAEMV RRFDLADVTD ALPDALPLGI 420
  421 RQRLSLAVAM IHAPDMLILD EPTSGVDPIA RDSFWQILSD LSRKDNVTIF VSTHFMNEAE 480
  481 LCDRISLMHA GKVLVSDRPA AIIETRGAKD LEEAFIAYLE DAIGTKAAPA TPPEHQPVSA 540
  541 TSDLVEEWAG KVATDGGTKF SLRRMFAYTR REALELRRDP IRAALAILGS VLLMLVVGYG 600
  601 INLDVENLSF AVLDRDDTTV SRDYVLQIAG SRYFTQKAPI TDYADLDRRM RSGELSLAIE 660
  661 IPPGFARDAA HGRKVQVAAW IDGAMPVRAE TVQGYVQGIH ASWLTQKARE LYGKSATVGD 720
  721 FQLQIRYRYN PGVESLVAMA PAVIPLLLMM IPAMLAVLSV VREKELGSII NFYVTPVTRV 780
  781 EFLVGKQLPY VALAMLNFLM LTAVAVFIFR VPFTGSFLTF TFGALLYVII ATGMGLVIST 840
  841 FMSSQIAAIF GTSLITLIPA VQFSGMTDPV SSLQGAGAFI GRIYPTTYFM VIARGTFSKA 900
  901 LDFADLWSAF VPLLITVPVL LCLGAVLLKK QAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle