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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89359528, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEWHEQAPF PCPVRHPRRA GGPRLGGGAG GDPAVRVPRL CAGIARSGRL LAGEFRGAAA  60
   61 PALCAGVRAD RVDLPAHCLH HPCGGLSAGL RAGAHAQRGA EVVPADHGGD AIVPRRSGAD 120
  121 LFLDHRSGEH RLHQFHPHGP RPRRTAGADD VHHLWRGGGA GACDPAGDGH HARRRALPHR 180
  181 RGLREGGHLA RRRAGEGVPH GDAAALHAGR GGGRLHRLRL DLFRLRDSPD DRRRTGEHDL 240
  241 DPRLSAGLCL LQFPVRGGAV HHRHRAHLRG AGHGEAGHPP AGKDRSPLMR RRLIPARVGE 300
  301 RILKVAGWSV VALIIAFIIL PAVVVAISAF NDRAILAFPP QSWSLRWFRR AFTYRDFAVG 360
  361 FQNGLIITAF ASSIALVVGA GFAFAIDRYS FRGKRTLEAM LTSPLVIPHF TIGLGFLILA 420
  421 AQVHATRTFA LVIVCHVVLV LPFVMRSVYV SLRNLDGRLE LAAASLGARP GMALWTVTLP 480
  481 LLIPGLFSGW LFAAILSFNE FTASLFVTAQ ATQTLPVAMY NYVREYADPT LAALSVIYIV 540
  541 VTAGLLTLAN QFLGLGKVLN VEHAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle