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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89343006, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLELSIGG MTCASCAARV EKKLNKLDGV TATVNYATEK ARVEFGDNVS TDQLVSAVES  60
   61 AGYQAALPEP PNPPDVEPAD PTAALRRRLI ICVALSVPVI AMAMAPPLQF TYWQWLSLTL 120
  121 AAPVVVWGAW PFHRATWANL RHGTATMDTL ISVGTLAAFG WSIYALFWGT AGVPGMTHPF 180
  181 ELTIARTDGS GNIYLEAAAG VTTFILAGRY FEARAKRRAG AALRALLELG VRDVTVRRGA 240
  241 AEHRIPIDQL RVDDEFVVRP GEKVAADGII VEGASAVDAS MLTGESVPLE VKPGDRVVGA 300
  301 TVNVDGRLVV RAERVGADTQ LAQMARLVED AQNGKAQAQR LADRISGVFV PVVLGLAVAT 360
  361 LGFWIGSGYP VAAAFTAAVA VLIIACPCAL GLATPMALMV GTGRGAQLGI LIKGPEVLES 420
  421 TRRVDTVIVD KTGTVTTGDM TLVDVFAADG EQPDEVLRMA GAVESPSEHP IAAAIAGGAR 480
  481 DKLGDLPAVD GFANLRGLGV EGDVEGRRLT LGRLRLLSDR SFEIPDDLAS AVARAEAGGS 540
  541 TAVTVGWDGR ARGVLMVADA VKPTSAEAIS LLKRAGLTPI MVTGDNEAVA RTVAAQVGID 600
  601 EVVAGVLPQD KVDTVTRLQR DGRVVAMVGD GVNDAAALAQ ADLGMAMGSG TDVAIEASDL 660
  661 TLVSNDLRAV PDAIRLSRKT LSTIKSNLFW AFAYNVAALP LAAAGLLNPM IAGAAMAFSS 720
  721 VFVVTNSLRL RAFTPSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle