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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145215324, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGPLARGIR MGEPPQERSR DFKASAIRLL RRLTPQRGMT IAVMLLGVGG IAIGVVGPRI  60
   61 LGHATDLLFN GVIGRQLPAG STKEQAIEAA RARGDTTFAD LLSGMDVVPG QGVDFAAVAR 120
  121 TLMLALGLYL VAALMVWIQA RLLNVVVQRT MVSLRADVED KVHRLPLRYF DSRQRGEVLS 180
  181 RVTNDVDNLQ QSLTMSITQL LTSVLTVVAV LVMMLTISPM LTLLTVVTVP LSLWVTRSIA 240
  241 KRSRKLFVAQ WTNTGRLNAH IEETYSGFTV VKTFGHRARA EDQFRELNDD VYHASFGAQL 300
  301 LSGLVSPATI FIGNLSYVAV AVVGGLQVAT GQITLGGIQA FIQYVRQFNQ PLTQIAGMYN 360
  361 TMQSGIASAE RVFDLLDAEE EPADPVEALP ASADRRDGRV EFDGVWFSYR PGTPVVEDLS 420
  421 LVAEPGQTIA IVGPTGAGKT TLVNLLMRFY DVDSGRILLD GTDITTVSRG SLRSRIGMVL 480
  481 QDTWLFAGTI YDNIAYGRPD AAHDEVIEAA TAAYVDRFVH TLPDGYDTRI NDGGTNISAG 540
  541 EKQLITIARA ILARPQVLVL DEATSSVDTR TEVLIQHAMR ELRRDRTSFI IAHRLSTIRD 600
  601 ADTILVMEAG RIVERGTHSE LLARRGEYWT MVNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle