YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145215233, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGWEIFWDV IPYVTLAVVI VGTWWRYRYD KFGWTTRSSQ LYESRLLRIG SPMFHFGILV  60
   61 VIVGHVIGLV IPESWTDAMG LSDHAYHIQA LVLGAIAGVC TLVGISLLVY RRRTQGPVFM 120
  121 ATTVNDKVMY LVLVLAIVAG LACTLIGATP AGAEHNYRET VSPWFRSIWV LQPRGDLMVE 180
  181 APLWFHIHVL LGLTLFCLWP FTRLVHAFSA PIGYLFRPYI VYRSRDAAGK GELVGSAPHR 240
  241 RGW

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.92
Transmembrane Helix	7	27	0.91
Cytoplasmic	28	48	0.90
Transmembrane Helix	49	69	0.93
Non-Cytoplasmic	70	86	0.88
Transmembrane Helix	87	110	0.92
Cytoplasmic	111	128	0.96
Transmembrane Helix	129	151	0.92
Non-Cytoplasmic	152	183	0.95
Transmembrane Helix	184	202	0.93
Cytoplasmic	203	243	0.92