YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145215031, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDAKRPDPK RRSSSAKKAP ASRPGKSGDA GRAKPRAIAA RRESRSAEPP PTAREDAEFV  60
   61 ERPDGDGDGA GSIRESILAS AEAAAEQRFG SAARRAAILA AVICVLTLTI AGPVRTYFSQ 120
  121 RTEMKQLQAS EAQLREQISE LEEQKAKLAD PVFIAAQARE RLGFVMPGET PYQVQLPPGA 180
  181 AVAPNIPAEE LLEPKNNDPW YTSLWHTISD VPQGISPTAP PVPPGAPAPP PTAPGAPAPG 240
  241 G

Type	Start	End	Confidence
Cytoplasmic	1	95	0.90
Transmembrane Helix	96	118	0.85
Non-Cytoplasmic	119	241	0.94