YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145218180, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDERDGVSS ADTDNGTETD DGDNRGQTAV VTRPQRPTGK RSRRAVEADD DADESPETDS  60
   61 SGSGSKDDDG RGPKARKKTS KRPKDQPSRN PIAFVINYLK EVLGELRKVI WPNRKEMIAY 120
  121 TTTVLFFLIF MVAMIGGVDL GLARLITWIF A

Type	Start	End	Confidence
Cytoplasmic	1	116	0.98
Transmembrane Helix	117	140	0.87
Non-Cytoplasmic	141	151	0.79