YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89321322, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALDRRELAA VFAGGAVGTL ARAAFEELAA ADPGRWPWPT FTVNIVGAFL LGVFVTRLLE  60
   61 RLPVSSYRRP FLGTGLCGGL TTFSTMQVET IRMLEHGHHW LALGYVAASI AVGLVAVYLG 120
  121 TVLTRRVRVR S

Type	Start	End	Confidence
Cytoplasmic	1	7	0.74
Transmembrane Helix	8	25	0.74
Non-Cytoplasmic	26	37	0.80
Transmembrane Helix	38	59	0.91
Cytoplasmic	60	69	0.87
Transmembrane Helix	70	91	0.87
Non-Cytoplasmic	92	100	0.84
Transmembrane Helix	101	122	0.94
Cytoplasmic	123	131	0.90