YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89158835, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKYWLTLG AVILVIAGLF FNSYYISGGS EDNVQTGTAI GLLAPDFTLT KLSGEEVSLS  60
   61 DFRGKKVFLN FWASWCPPCQ AEMPYIQKLY TEHGDDVAIL GVDIGEDKGT VAEFMLVNGY 120
  121 TFPVALDKKR EVAAKYLVRG IPTTYIIDED GIVTHRHVGP LYYEQMTELL ELDQNNTP

Type	Start	End	Confidence
Cytoplasmic	1	5	0.50
Transmembrane Helix	6	26	0.52
Non-Cytoplasmic	27	178	0.94