YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220932514, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKLKKDLEE ENKNTSPGWM VTYGDMMTLL LVFFVFLYSF SVMNVEKFEG FISALQAKLG  60
   61 VMPGGKTIMD EELLSRGSIG NRFNPSNQVF EKVMGQINRY VEKEKLSDRV KMELTKRGLV 120
  121 VRLTGQVLYD IGKAEIKPGG KRLLDEIAGI IEKIPNEIAV EGHTDNWPIH NEQFPSNWEL 180
  181 STTRATNVIK YFIERHGIDP SRLSAAGYSE YRPLYPNDTV EHRAKNRRVE IVILNTLHNK 240
  241 AMERR

Type	Start	End	Confidence
Cytoplasmic	1	20	0.74
Transmembrane Helix	21	42	0.88
Non-Cytoplasmic	43	245	0.79