YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|219993630, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLYMQKRCC GIIAVICLVL IVVFVLNGCQ GQKEKNDLPA ASKSSFLMDT IVSMKVYGEK  60
   61 PDKVIEEAFQ RMREIENEMS VTLKSSYIYK INSNPGEPVK VDSDTFRVIR KAITYAEITD 120
  121 GNFDPSIRPL VSLWGIGTEN ARVPARSEIE EAKRLVNYKL IKLDEEEKTV VLQKPGMGID 180
  181 LGAIAKGYAA DEVRRIFKKH RVEHAFVNLG GNVLVVGGKP DGSPWVVGIQ DPRRERGSVM 240
  241 ASFKVKDKAI VTSGNYERYF EKDGVVYHHI IDPKTGSPAR TNLLSATIIC DDSFDADALS 300
  301 TSVFVMGVDR GLELVESLNG VEVMFINKDL EIILSEGLKN KIKVLNQDFK LVGNDNDEQI 360
  361

Type	Start	End	Confidence
Signal Peptide	1	31	0.97
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	360	0.99