YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89159869, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKIVIVGG VAGGASTAAR LRRLDEEAEI IIMEKGDHIS FANCGLPYHI GGVIKEREKL  60
   61 LVQTPESMEA RFNIDVRVRN EVVRIDRDKK EIKVRDLNKN EIYCESYDFL ILSPGAEPIK 120
  121 PPIDGVDFPN VFTLRNIPDT DNINEFISKN NPDRAVVVGG GFIGLEMAEN LQERGLKVSL 180
  181 VEMAPQVMGN MDYEMAAMIH NHLREQGIDL HLNDGIASVN RKGGKTVVVL QSGREIETDL 240
  241 VIMAIGVRPS TKLAREAGLE IGESGGIKVN EYLQTSDRYI YAIGDAIEVI HLVTGQSVLI 300
  301 PLAGPANKQG RIVANIISGK SDKYKGTQGT AVARVFNLTV ASTGASEKLL KKAGRDYLVS 360
  361 YTVSKNHAGY YPGAKPMTIK LLFTPDRGVV LGAQIVGYEG VDKRIDLLAT AVRHEMTVYD 420
  421 LQELELAYAP PFGSAKDPVN MAGYTASNIL DGLVEVVYWD DINNLDKNTI LLDVREEVET 480
  481 QIGSINGSVN IPLNSLRERL DELDKDKDII VYCAMGLRGY IGYRILKQHG FKKVKNLSGG 540
  541 YKLYKAVQDD KSEEINTAGY QELNLTSNPG AGRKAGEEIS REMSSNRVKL DACGLQCPGP 600
  601 IMQVYHKMEE LKDGDILEVT ASDPGFLRDV EAWCDNTGNT LVDKEKQGDV YKAVIKKGRG 660
  661 FKVENNTSSE DTVATSKGKT MVVFSGELDK AIASFIIANG AASMGNKVTM FFTFWGLNIL 720
  721 RKDRAVNTKK GFMEKMFGKM MPRGSKKLPL SKMNMMGLGP RMIRKVMEGK GVDSLESLIK 780
  781 QARENGVNMV ACQMSMDVMG IKKEELIDGV EVGGVASFLG AADKSNMSLF I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle