YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|219994433, gi...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANNYQESLA GAWETYERQV EGKNKKKKGY RIKGYNPSPV YLITKRIIDI LASATGLILA  60
   61 SPVMLLVAIA IKLDSPGPII YSQVRVGKGG KEYLIFKFRS MVNNAEARTG AVWARKDDNR 120
  121 VTRVGKFIRK TRLDELPQLW NVLKGEMSLV GPRPERPLFV EKFEREHPGF KNRLLVKPGL 180
  181 TGLAQVNGGY DIKPHQKLRL DLLYISNQSL WLDFKIILKT IYVVIFGHGA R

Type	Start	End	Confidence
Cytoplasmic	1	49	0.80
Transmembrane Helix	50	71	0.82
Non-Cytoplasmic	72	231	0.91