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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89209608, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METWYNKSIE EVSKDQKTNI DQGLTVEEAK KRLDETGPNR LKESKGRSPW QMFIDQFKDA  60
   61 LVIILLFSAI ISAAVGEISD SLVIAVILIL NSTLGVIQEY KAEKSLAALK ELASPRALVL 120
  121 RDGKQQKVEA SQLVPGDIVL LDAGDYVPAD LRLISVTDLK IEESVLTGES VPVEKTDKII 180
  181 KDEKPPLGDQ KNMAFMGTIV TYGRGRGIVT GTGMDTEMGK IAEALKDDKR EPTPLQKRLD 240
  241 RMGKKLGLAV IGIAAIIILM GWLRGIDLLE MFMTGISLAV AAVPEGLPAV VTIVLALGVQ 300
  301 RMIKRHAIIR RLPAVETLGA TTIICTDKTG TLTKNEMTVK SIFLPGRNIK VSGEGYKPEG 360
  361 KFIEGNTEVK TNSDKDLALL LKAASLCNNA ELTRNKDNNR DIIGDPTEGS LVVAAEKAGF 420
  421 TKERLNNDYE RIKEFPFDSE RKRMSTVHRT PDKKVIAFVK GAPDQILKRC IGYQINGKVK 480
  481 DLDDNVREEI VKQNKEYASQ ALRVLAVAYK PLDGENNLHI DNVEKGLIFL GLMGMIDPPR 540
  541 REVADSVKLC KQAGIRPVMI TGDYSLTARA IAEELGIYKN GDKIITGSEL EDMNPEELKE 600
  601 AVSLTTVYAR VSPHHKSKIV QALKDSNEVV AMTGDGVNDA PALKKADIGV AMGITGTDVA 660
  661 KEAADMVLTD DNFASIVSAV EEGRGIYSNI KKFIHFLLSC NVGEIITLFL AIIVGLPRPL 720
  721 IPIQILWVNL VTDGFPALAL GVDPAAPDLM EKPPRDPDEG VFAGKMGVNI ISQGLFIGLL 780
  781 TLVIFFLGLH YFSLPVGQTM AFATLSFSQL IQALNARSRE YSLFRLGILT NKYLILAIMI 840
  841 SGLLQLGVMF IPFLQAAFKV IPLTGTQWLI VLLASLTPLP YVEILKALGI TREE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle