YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163940501, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQKAVFKIA ILLVFIGLSL MVSSIQTKNV EAFSNQVIQR GASGEDVIEL QTRLKYNGFY  60
   61 TGKVDGVFGW GTYWALRNFQ QKFGLPVDGL AGAKTKQMLV KATKYDKSTA NKDTTTNKGN 120
  121 SGGGKQENKP PKSTGTNVPN GYSQNDIQLM ANAVYGESRG EPYLGQVAVA AVILNRVTSA 180
  181 SFPNTVSGVI FEPRAFTAVA DGQIYLTPNE NAKKAVLDAI NGWDPTGNAL YYFNPDTATS 240
  241 KWIWTRPQIK KIGKHIFCK

Type	Start	End	Confidence
Signal Peptide	1	27	0.93
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	259	0.99