YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163941072, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNTLLKLG VCVSLLGTIQ FVSTISSVKA EQKLEQKVIK NETGTISISQ LNKNVWVHTE  60
   61 LGYFNGVAVP SSGLVLTTSK GLVLVDSSWD DKLTKELIEM VEKKFKKRVT DVIITHAHAD 120
  121 RIGGIKTLKE RGIKAHSTAL TAELAKKNGY EEPLGDLQTI TNMKFGNIKV ETFYPGKGHT 180
  181 EDNIVVWLPQ YNILAGGCLV KSAEAKDLGN VADAYVNEWS TSIENVLKRY GNMNLVVPGH 240
  241 GEVGDRGLFL HTLDLLK

Type	Start	End	Confidence
Signal Peptide	1	30	0.92
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	257	0.99