YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163941648, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSKVIKLQ DRVPKLKNQN KKNKKPVNHR LILYISILFL LVLFLIYFRS PLSNIKKISV  60
   61 FGNHYMTDEQ VMKESGVTYD TSYFRVTAHK AEENLTKRKE IKEVNVKKRF PNKIDVHIEE 120
  121 YLTIGYINKD GKLQPLLENG KTLDVLPNGK LPVAAPIFEP FKEEKMKELI AELEKLTPTI 180
  181 LRSISEIRYT PTNANEDHLT LYMNEGYEVS TTIQNFAKRM ETYPLILKTI EPGKKVLIDL 240
  241 EVGAYTKELG AEEKKE

Type	Start	End	Confidence
Cytoplasmic	1	30	0.93
Transmembrane Helix	31	48	0.97
Non-Cytoplasmic	49	256	0.98