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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|163940437, gi...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKLQTNKGA RYMMIAFIVL FLTMLLRIFY IQAVGVVHNV NVKDLAKEQQ NKNGVLEANR  60
   61 GTIYDQNGKV LVQDSTTYRI VVNLKGKDKL KDKEDTAQRL ADALEVDKEE IMKNFHEGRT 120
  121 QVEIGKIGRN LSREAKEEIN NLKIPGVSFT TEKARVYPNE DFASYILGFA RPDDKGNAVG 180
  181 KFGLEESLDK YLRSTNGNVS YVGSRKGIPL TNDIGKVEPA KNGNNVYLTL DKQINSFLED 240
  241 AMNKAAQHYD PSMLVGIIAD PKTGKILAMS SKPSYNPNKG DIEYFLNDPI ANAFEPGSTM 300
  301 KVFTLASAIN EGVYNGKEYF QSGKYAVGSA EIKDHNGGYG WGSITFDEGF ERSSNVAFSI 360
  361 LEDQLLKPNK FKQYMNKFGF NQKTGIDLPG ESKNTLLLNT QIQQVTTSFG QGSTVTPIQI 420
  421 VQAATAIAND GKMMQPYIVD KVVNPTNKQV IMENQPKEIG NPIKKETAEE VRNLMERVIT 480
  481 SSKGTGTMYK IDGYPIGGKT GTAQIPNPEN GRYMEGKDNY IFSFLGMAPI DDPQLVVYLA 540
  541 IKQPKLKGNE YGAQPLAEIF KPVMKNSLEY LKVKPYTEKQ MVDATKQSEI KVQNYVNQTM 600
  601 DTVKNIAEKE KLQPVLLGEG KIIKQYPQTS EVMSEGDRIL LVGSNVKMPN LKGWSMRDVM 660
  661 YFSKLLKLDL KTSGMGYVTS QSIEKGQDLQ EGDTLELELE PPLQPLVEAN TN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle