YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89153264, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKKLALFSF ILIFTLIFAG CSNNKDSAAK KDGKLSVYTT IFPLADFAKK IGGDYVNVET  60
   61 IYPPGADSHT FEPSQKQTVQ VAKADLFVYN GAELEPFAEK MEKSLKKENV KIVNASKDIE 120
  121 LRASSEEEQH DHGDGHKEDE HHHDKDPHVW IDPTLAMKQA EKIKNALVEL QPEHKKEFEK 180
  181 NFAALQTKFT DLDDQFKAVV ANAKTKEILV SHAAYGYWEQ RYGLKQIPIA GISASDEPSQ 240
  241 KQLTDITKTV KEHGLQYILF ETFSTPKVAS VIQKETGTKI LRLNHLATIS EDDAKNNKDY 300
  301 FTLMEENVNT LKEATN

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	316	0.99