YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163940424, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTSIITII CFFTVISIFV FQQVNEQKYT KAINQSNHIK NIAHRGASAY APEHTLEAYQ  60
   61 LGQQLKGDYI EIDLQMTKDG HLVAMHDETL NRTTNGTGFV KDHTLDKIKQ LNAGSFFNKK 120
  121 HPNLAKKEFE DTKVPILEEI IETFGHNANY YIETKSPDEY PGMEEKLLEI INHYQINDKV 180
  181 IIQSFSEESL RKIHSLNDNM PLVQLLSYKK AVQLTDSEIE KYKTYCIGLG MNYKYIDAAY 240
  241 VKKIKNYGLE VHPFTVNNEK DMKKLLSWGI DGMFTNYPDR LHSVLDLKSH N

Type	Start	End	Confidence
Signal Peptide	1	22	0.84
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	291	0.99