YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89153492, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRKNKKEAG FTLIEMIACL LLLSMFFLLL PRLHIMGIEN THSKGLNDWE WDVFLGQMQL  60
   61 EFREVLSGRK IELENGGNIL RFQLRNGDQV TYEKLNSNLI RKVNMRGREF ILQRIEAISY 120
  121 KLTPHLLYIY VKDISGEIYE GVAVRYSEIE IET

Type	Start	End	Confidence
Cytoplasmic	1	10	0.70
Transmembrane Helix	11	30	0.76
Non-Cytoplasmic	31	153	0.95