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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|163863123, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVVIKKKRN RGKRIFIWSS SIVLFLFICA MIFLNIYTLS SVPKIDGTIK LEDLQHAVAV  60
   61 KRDSKGVPHI KAENAHDLYF SQGYVQAQDR LFQMDLSRRQ ASGMLSEVVG EAAVDRDKLF 120
  121 RTLGLRRAAE ASVSQYDGEA KYALQSFADG VNTFIREAKE EKKLPVEFTI LGYEPAEWSI 180
  181 VDSLTIGKYM AFDLGGHWHG QAFRYWALKN LPEEQANELF PTYPKDAPRL LAELKNTNVD 240
  241 VAQSFSKTVI PPEFNGSNNW VVSGEKSVSG KPILADDPHL SLATPSIWYQ SQLEMKDLHV 300
  301 SGVIFAGVPG VILGHNDKIA WGVTNTGPDV QDLYIEKRNP NNENEFLYND KWEKATVVNE 360
  361 SIKVKGGKTI PYNVTVTRHG PVISEFADKG KEKTKTVFAL KWTALEPSAE LKAVLNMNKA 420
  421 KDWNEFETAL QDFHTPTQNF VFASNDGTIA YKANGNIPVR KKGDGSLPVP GWTDEYEWEG 480
  481 YIPFDQLPKV INPKQGFIST ANNKIVDDNY PYHISNTWAQ PYRQMRIQEF LQEKEKYTVK 540
  541 DLEDLQMDQK NLYGKEFTPI LLKELNKASL NEVEKEGVKQ LTKWNFYDSK DEAAPLIFHL 600
  601 LMKEISNTLF SKEIPKDVME LFEGKSQVVD ELIRKEVAGE NSAWFTKYGG FTEVVHTSYE 660
  661 NVMKKLQKEY GPNVTEWKWG DYHQLAFTHP ISKSSSMLAL FAFNREKPIP IGGSQVTVQA 720
  721 ASYGDNGIVN HGASWRFVID TKDMSNGYHI VGPGQSGHFR SDWYHDQIDD WVNGTYHTTT 780
  781 LNMDGIEGKV LTLEPK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle