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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CARB_BACWK
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRLDINTI LVIGSGPIVI GQAAEFDYSG TQACQSLREE GYKVILVNSN PATIMTDTAT  60
   61 ADKVYIEPLT LEFVSRIIRK ERPDALLPTL GGQTGLNMAV ELAKSGILEE CGVEILGTKL 120
  121 SAIEQAEDRD LFRTLMQELN EPIPSSTIIH TLEEAHEFVK EIGYPVIVRP AFTMGGTGGG 180
  181 ICNNEEELIE IVSGGLKHSP VTQCLLEKSI AGCKEIEYEV MRDSNDNAIV VCNMENIDPV 240
  241 GVHTGDSIVV APSQTLSDRE YQMLRNTSLR IIRALGIEGG CNVQLALDPH SFQYYVIEVN 300
  301 PRVSRSSALA SKATGYPIAK LAAKIAVGLT LDEIINPVTQ KTYACFEPAL DYVVSKIPRW 360
  361 PFDKFESANR TLGTQMKATG EVMSIGRNLE QSLLKAIRSL ELGVYHLELD HLKELDKETM 420
  421 KKRIIKADDE RLFVVAEAIR QGVTKEEINE WCEMDFFFLQ KVENIVNMER EVKANVGNME 480
  481 VLQAAKEMGF SDHYIANAWN KTEREIYDMR KESNMTPVYK MVDTCAAEFE SATPYYYSTY 540
  541 GDENESIVTD RKSVVVLGSG PIRIGQGVEF DYATVHSVWA IKEAGYEAII VNNNPETVST 600
  601 DFSISDKLYF EPLTIEDVMH IIDLEKPEGV IVQFGGQTAI NLAAKLEAHG VKILGTSLED 660
  661 LDRAEDRDKF EAALTKLGIP QPVGKTATTV EQAVAIADKI GYPVLVRPSY VLGGRAMEIV 720
  721 YRQEELLHYM KNAVKVHADH PVLIDRYMVG KEIEVDAISD GENVFIPGIM EHIERAGVHS 780
  781 GDSIGVYPPQ SLSEKLKEQI IEHTIGLGKG LNIVGLLNIQ FVVFKDEVYV IEVNPRASRT 840
  841 VPFLSKITGV PMANIATKVI LGQNLVEQGY GTGYHPEEKE VYVKAPVFSF AKLRSVDTTL 900
  901 GPEMKSTGEV MGKDLTLEKA LYKGLVASGI NIPTHGSVII TVADKDKEEA LEIAKRFHEI 960
  961 GYNLLATAGT AQSLTEQNIP VQVVNKIDSE DYNLLDIIRQ GKAQFVINTL TKGKQPARDG1020
 1021 FRIRRESVEN GVACLTSLDT TRAILRVLES MTFSAHSMKE ITQTKRHEVV HA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle