YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163862770, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTSLQKMK KIMLSGGILL TGLLTFGFSE KTSAHGYVES PASRSYLCKQ GVNVNCGPVQ  60
   61 YEPQSVEGIG GFPQLGPSDG QIAGAGHFPA LDVQAVDRWK KVTLNGGTNT FKWKLTAPHS 120
  121 TKEWKYYITK KDWNPNMPLT RSSLDLVPFY VKNDGGVRPG TTVTHEANVP TDRSGYHLIL 180
  181 AVWEIADTGN AFYQVIDVNL VNNGLNSNFA FNNVVQVPTL F

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	221	0.99