YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163938634, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHLLKIIMV MVLAGSISGC SELEEIEERG FVVGAAYDIV KEKKSNPIMK GTYQMVLPSK  60
   61 LAQQGGQGGG DSENYINVSA KADSVFEQIR IIAKKISRSL FFPHIQVIIF SKDLLANPYV 120
  121 LQNTLDVYIR DHEMRRNIRL FVSKKNAEAI LKQSAKPENL PAQYIDMLAE HPPKNAQMIE 180
  181 AARIGEVQQK MIANQSFVLP ILELTKQGVQ MNGAALFRGK DNKCVGSLNG EETLGMNYVI 240
  241 GKKIGGFYTI RKQGQLVTYE IHKMHRKIKV STENATKPKF DIHLSLEGTL AELHFSDHKQ 300
  301 IMNEKRLKKT IAEEMEKRIQ KSIKLVQKKY KVDVLALGEV YKRHNYKEWK KIDKNWDQGE 360
  361 NYFSNAEVTV HVHPTIEHSG SALPKRVK

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	388	0.99