YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163864101, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLSISFA LILIVSMFSA CSNGEEKANG ENKKVLVMGT SADYKPYEYV EASKSDEIIG  60
   61 FDVDIAKYIG KELGYEVKVK DMDFGGLLAS LNSGKVDFVM AGMTPTAERK NNADFTDIYF 120
  121 VAKNMIVSKK GSNIKSLEDL KGKKVGVQTG SIQEEKAKEF QKQVDFKAEG RDRIPEIVQE 180
  181 IKAGRFDAAI IEDTVAKNYL EKMKELQGIE IQEAPEEVGA AIALPKNSDK TEEFNKVIKK 240
  241 MQENGEMDKL VKKWFGSGK

Type	Start	End	Confidence
Signal Peptide	1	24	0.93
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	259	0.99