YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89154111, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMQNISFLG AGSIAEAIIG GLLNANVVKG EHVTVSNRSN ETRLQELHKK YGVKGTHNKK  60
   61 ELLADANILF LAMKPKDVAE AVIPLKEYIN NDLLIISLLA GVSTHSIRNL LQKDVPIIRA 120
  121 MPNTSAAILK SATAISPSEH TTEEHIRTAT SLFETIGLVS IVEEEDMHAI TALSGSGPAY 180
  181 IYYVVEALEE AAKKIGLKED VAKSLILQTI IGSAEMLKAS EKHPSILRKE ITSPGGTTEA 240
  241 GIEVLKEHNF QQALISCITQ ATKRSHDLGK TLEEIAKEK

Type	Start	End	Confidence
Signal Peptide	1	17	0.49
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	279	0.93