YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89207926, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKKMTKLT AVVAPVLAMS MALTACSGSG GEKKTTTTSN GGEEKKSDTK YAAKQVLNRT  60
   61 ETNEIPTMDT SKSTDTLGSQ ILGNTMEGLY RLDKDNKPIP AAAESSTKSE DGKKYTFKLR 120
  121 KDAKWSNGDP VTAKDFVFAW QRLLDPKTAA EYAFITYYIK NAEAINKGEK PVTELGVKAT 180
  181 DDYTLEVELE QAVPYFLNLV AFPSYYPLNE KFVKEKGEKF GLESDTTVYN GPFVLTDWKH 240
  241 EQGWKLKKND QYWDKKTVKL DEINYSVVKE VATRVNLYDT GAIDFALLAG EFVDKYRNKK 300
  301 DEFGTYSEPS TFYLRLNQKR AGQDTPLKSK KLREAIALSI DKKNLANVIL NDGSKGADYL 360
  361 VPKGLAAGPD GKDFQETFKN GLKQDTKKAA AAWDEAKKEL GKDQVTIELL NYDTGNAKKV 420
  421 GEYVKDQIEK NLKGVTVNIK LQPFKQKLKL ESEQEYDIAY GGWSPDYADP MTYLDMFETT 480
  481 NSQNQMSYSN SKYDESIKKS KTELMSDAKK RWEELGKAEK VLLEDDVALV PLYQNARSYV 540
  541 MQPNIKGIVK HNISPEYSFK WAYVEEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle