YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163939786, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.96
Transmembrane Helix	17	40	0.89
Cytoplasmic	41	52	0.91
Transmembrane Helix	53	74	0.90
Non-Cytoplasmic	75	94	0.88
Transmembrane Helix	95	116	0.93
Cytoplasmic	117	125	0.92
Transmembrane Helix	126	146	0.95
Non-Cytoplasmic	147	181	0.91
Transmembrane Helix	182	203	0.89
Cytoplasmic	204	217	0.88
Transmembrane Helix	218	239	0.92
Non-Cytoplasmic	240	328	0.99
Transmembrane Helix	329	352	0.90
Cytoplasmic	353	362	0.96
Transmembrane Helix	363	386	0.89
Non-Cytoplasmic	387	414	0.97
Transmembrane Helix	415	437	0.91
Cytoplasmic	438	467	0.96

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLELARIQ FASTTIFHYF FVPLSIGLAF IIALMQTLYV VKGQEIYKKM TKFWTQIFLV  60
   61 NFAVGVVTGI LQEFQFGMNW STYSRFVGDV FGPSLAIEGL LAFFIESTFL GLWVFGEDKL 120
  121 PKRVHLLCIW LLSIGTMLSA FWILTASAFM HAPVGYEMAA DGRAQMNDFW AIIQNPQLWV 180
  181 QFPHTITAAI ATGAFFIAGV SAWKISKGQE TAVFKKSFRV SIVVGTITTA LVLFFGHAQA 240
  241 QNLIKTHPMK MAAAEALWNT SEDPAPFTVF AKIDTEKKEN SFEIQIPYML SLLSYDKFSG 300
  301 QVEGMNQIQK QYEEKYGPGD YIPPVHTMFW SFRAMVMSGT FMLLLGMYGW FLSRKDRLTE 360
  361 NPWYLKIMVY AIALPFIGNT VGWIMTEMGR QPWVVFGVMK TEDAVSPNVS FGEVLFSLVS 420
  421 FTSLYLIVGG ITVYLFVRII KGHANKKTKK DYQSHDPFDK EEEYVIS