YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89207439, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRIDVLIKT FVATFGAFCG YFLGGWDTTL KVLVVMAAID YITGVIAAGF NGELKSKVGF  60
   61 KGIAKKVVLF LLVGAATQAD AAIGTNSAIR EATIFFFIGN ELLSLLENAG RMGIPLPSAL 120
  121 TNAVEILGGK QKQEEKKGDV E

Type	Start	End	Confidence
Cytoplasmic	1	6	0.88
Transmembrane Helix	7	25	0.93
Non-Cytoplasmic	26	31	0.79
Transmembrane Helix	32	52	0.89
Cytoplasmic	53	66	0.79
Transmembrane Helix	67	84	0.68
Non-Cytoplasmic	85	141	0.48