YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163938067, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTIQLYTM LSMIGMGAWI GASLDTYQRF LKRQERKRWL VFIHDILFWI VQALFVFYVL  60
   61 LRVNEAELRI YVFLALLCGF AAYQSLLKAL YMKMLNFLIY IFVQTTQFFV RIIQLLMIKP 120
  121 VIIIAQLFIA FILFLFRILL SIGHVLWKMV IWILLFIWKV FFSPVRFIAS LIWKLLPNRV 180
  181 KLFIMKHVGF LQYVAKLKGH IFQLWVRIKK KLGGPRK

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.79
Transmembrane Helix	7	27	0.88
Cytoplasmic	28	39	0.84
Transmembrane Helix	40	61	0.93
Non-Cytoplasmic	62	67	0.85
Transmembrane Helix	68	87	0.91
Cytoplasmic	88	107	0.55
Transmembrane Helix	108	141	0.73
Non-Cytoplasmic	142	148	0.35
Transmembrane Helix	149	176	0.73
Cytoplasmic	177	217	0.56