YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228746682, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKKVYSFL SQAFIFSAIM LVSNIIATHL PIPMPSSVIG LVILFSLLCL KVIKLEQVES  60
   61 LGTALTGIIG FLFVPSGISV INSLGVMGQY FVQILTVIVV ATIILLAVTG LFAQFILGKD 120
  121 DKEIEDTKEL KVVNKGRKHG KVA

Type	Start	End	Confidence
Cytoplasmic	1	7	0.91
Transmembrane Helix	8	28	0.92
Non-Cytoplasmic	29	33	0.71
Transmembrane Helix	34	53	0.91
Cytoplasmic	54	61	0.82
Transmembrane Helix	62	84	0.89
Non-Cytoplasmic	85	91	0.76
Transmembrane Helix	92	113	0.92
Cytoplasmic	114	143	0.93